public class Alignment
extends java.lang.Object
| Constructor and Description |
|---|
Alignment(Alignment a)
Once we finished collecting, we should turn the alignment into an array backed list
|
Alignment(int frequency) |
| Modifier and Type | Method and Description |
|---|---|
void |
addPiece(AlignmentPiece alignPiece) |
boolean |
equals(java.lang.Object o) |
java.util.List<AlignmentPiece> |
getAlignment() |
int |
getFrequency() |
int |
hashCode() |
void |
incFrequency(int frequency) |
int |
size() |
java.lang.String |
toString() |
public Alignment(Alignment a)
a - public Alignment(int frequency)
public void addPiece(AlignmentPiece alignPiece)
public java.util.List<AlignmentPiece> getAlignment()
public int size()
public boolean equals(java.lang.Object o)
equals in class java.lang.Objectpublic java.lang.String toString()
toString in class java.lang.Objectpublic int hashCode()
hashCode in class java.lang.Objectpublic int getFrequency()
public void incFrequency(int frequency)